ILMN Illumina

Illumina Inc.
Company
Patents are sorted by USPTO publication date, most recent first
APP
Utility
Artificial Intelligence-Based Generation of Sequencing Metadata
24 Sep 20
The technology disclosed uses neural networks to determine analyte metadata by (i) processing input image data derived from a sequence of image sets through a neural network and generating an alternative representation of the input image data, the input image data has an array of units that depicts analytes and their surrounding background, (ii) processing the alternative representation through an output layer and generating an output value for each unit in the array, (iii) thresholding output values of the units and classifying a first subset of the units as background units depicting the surrounding background, and (iv) locating peaks in the output values of the units and classifying a second subset of the units as center units containing centers of the analytes.
Anindita DUTTA, Dorna KASHEFHAGHIGHI, Amirali KIA
Filed: 20 Mar 20
APP
Utility
Artificial Intelligence-Based Sequencing
24 Sep 20
The technology disclosed processes a first input through a first neural network and produces a first output.
Kishore JAGANATHAN, Anindita DUTTA, Dorna KASHEFHAGHIGHI, John Randall GOBBEL, Amirali KIA
Filed: 21 Mar 20
APP
Utility
Training Data Generation for Artificial Intelligence-Based Sequencing
24 Sep 20
The technology disclosed relates to generating ground truth training data to train a neural network-based template generator for cluster metadata determination task.
Anindita DUTTA, Dorna KASHEFHAGHIGHI, Amirali KIA
Filed: 20 Mar 20
APP
Utility
Artificial Intelligence-Based Base Calling
24 Sep 20
The technology disclosed processes input data through a neural network and produces an alternative representation of the input data.
Kishore JAGANATHAN, John Randall GOBBEL, Amirali KIA
Filed: 20 Mar 20
GRANT
Reissue
Compensator for multiple surface imaging
22 Sep 20
A system and method for imaging biological samples on multiple surfaces of a support structure are disclosed.
Wenyi Feng, Jason Bryant, Dale Buermann
Filed: 20 Mar 18
GRANT
Utility
Non-invasive prenatal diagnosis of fetal genetic condition using cellular DNA and cell free DNA
22 Sep 20
Disclosed are methods for determining at least one sequence of interest of a fetus of a pregnant mother.
AmirAli Hajhossein Talasaz, Gordon M. Cann
Filed: 20 Apr 18
APP
Utility
Systems, Methods, and Apparatuses to Image a Sample for Biological or Chemical Analysis
17 Sep 20
A fluidic device holder configured to orient a fluidic device.
Erik Williamson, Bryan Crane, Patrick Leung, Drew Verkade, Mark Reed
Filed: 14 May 20
GRANT
Design
Display screen or portion thereof with graphical user interface
15 Sep 20
Shile Zhang, Kristina Kruglyak, Mengchi Wang
Filed: 3 Dec 18
GRANT
Utility
Laser line illuminator for high throughput sequencing
15 Sep 20
Imaging systems including an objective lens and a line generation module are described herein.
Yinghua Sun, Stanley S. Hong, Marco A. Krumbuegel, Peter Clarke Newman, Simon Prince, Dakota Watson, Wenyi Feng, Andrew James Carson, Frederick Erie
Filed: 6 Mar 18
GRANT
Utility
Spatially distinguished, multiplex nucleic acid analysis of biological specimens
15 Sep 20
A method for spatially tagging nucleic acids of a biological specimen, including steps of (a) providing a solid support comprising different nucleic acid probes that are randomly located on the solid support, wherein the different nucleic acid probes each includes a barcode sequence that differs from the barcode sequence of other randomly located probes on the solid support; (b) performing a nucleic acid detection reaction on the solid support to locate the barcode sequences on the solid support; (c) contacting a biological specimen with the solid support that has the randomly located probes; (d) hybridizing the randomly located probes to target nucleic acids from portions of the biological specimen; and (e) modifying the randomly located probes that are hybridized to the target nucleic acids, thereby producing modified probes that include the barcode sequences and a target specific modification, thereby spatially tagging the nucleic acids of the biological specimen.
Jonas Frisén, Patrik Ståhl, Joakim Lundeberg, Gordon M. Cann, Leila Bazargan, Alex Aravanis
Filed: 4 Apr 16
APP
Utility
Substrates Comprising Nano-patterning Surfaces and Methods of Preparing Thereof
10 Sep 20
Substrates comprising a functionalizable layer, a polymer layer comprising a plurality of micro-scale or nano-scale patterns, or combinations thereof, and a backing layer and the preparation thereof by using room-temperature UV nano-embossing processes are disclosed.
M. Shane Bowen, Bala Murali Venkatesan, Steven M. Barnard
Filed: 21 May 20
APP
Utility
Sequence-graph Based Tool for Determining Variation In Short Tandem Repeat Regions
10 Sep 20
The disclosed embodiments concern methods, apparatus, systems and computer program products for genotyping repeat sequences such as medically significant short tandem repeats (STRs).
Egor Dolzhenko, Michael A. Eberle
Filed: 6 Mar 20
GRANT
Design
Display screen or portion thereof with graphical user interface
8 Sep 20
Eliza Van Gerbig, Igor Freilafert, Jeffrey Pohlmann
Filed: 2 Apr 18
GRANT
Utility
Disposable, integrated microfluidic cartridge and methods of making and using same
8 Sep 20
The disclosed embodiments concern microfluidic cartridges for detecting biological reactions.
Poorya Sabounchi, Behnam Javanmardi, Tarun Khurana, Philip Paik, Yan-You Lin
Filed: 11 Mar 15
GRANT
Utility
Enzyme-linked nucleotides
8 Sep 20
Presented herein are polymerase-linked nucleotides for improved distinguishing nucleotide sequences for different nucleic acid molecules.
Christian Gloeckner, Matthew William Kellinger, Lea Pickering
Filed: 15 Mar 13
GRANT
Utility
Tenant-aware distributed application authentication
8 Sep 20
Flexible authentication technologies customized to particular tenants of a data center network can be implemented.
Milan Karangutkar, Prabhu Palanisamy, Satnam Alag
Filed: 5 Jun 17
APP
Utility
Deep Learning-Based Techniques for Training Deep Convolutional Neural Networks
3 Sep 20
The technology disclosed relates to constructing a convolutional neural network-based classifier for variant classification.
Hong GAO, Kai-How FARH, Laksshman SUNDARAM, Jeremy Francis McRAE
Filed: 27 Jan 20
GRANT
Design
Display screen with a graphical user interface
1 Sep 20
Igor Freilafert, Eliza van Gerbig, Prita P. Hasjim
Filed: 17 Jul 19
GRANT
Design
Reagent cartridge
1 Sep 20
James Osmus, Erik Allegoren, James Blake, Philip Paik, Jay Taylor, Jack Godfrey-Wood
Filed: 25 Nov 19
APP
Utility
Two-filter Light Detection Devices and Methods Related to Same
20 Aug 20
Light detection devices and corresponding methods are provided.
Xiuyu CAI
Filed: 6 May 20